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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868857.1_cds_XP_016433586.1_29727
CDS Infomation

[gene=LOC107760080] [db_xref=GeneID:107760080] [protein=blue-light photoreceptor PHR2-like] [protein_id=XP_016433586.1] [location=join(57112..58080,59068..59297,59396..59488,59703..59781)] [gbkey=CDS]
Sequence

ATGGATTCCAAGAACCAATCTTCAGACAACCCAGAAAACCAAACACCTCAAGAAGACCAA
CAACTTGTTCCATGTCAACCTCTACCCATAGCCTCCATCTCACTTTCTCTCTCTACAATC
CTCCCCACCCACTTCCTTACTCCTCCCAAAATCTCCTCCACCGTTTTCAGACCCAACAAA
GTTAAAATCCCAACCCAAATTTCATCTCTTTCAAATCTCTCTCTTTCTGCTTCAGCCTCT
CTCCCTCCTCCTACAAAATCCAACTTCAAGTCCACTTTCTCTGCTAACCCACTTCAGGAT
TCTCTCACTCTAAACCCACTTCGCCCCTCTGAGCCTTCTAATGCCGCAGGCCTTCGACGA
GCATCCATCGTTTGGTTCCGTAACGATCTGCGTGTCCACGACAACGAGTCCCTCAACGCG
GCCCACAATGAGTCCATGTCTGTTTTGCCCGTTTACTGTTTTGACCCGAGAGATTACGGC
AAATCCTCATCTGGGTTTGATAAAACCGGCCCATATCGCGCTAGTTTCCTGATTGAATCC
GTCACTGACCTTAGGAACAATTTACAGTCAAGAGGGTCTGATCTTGTTGTTAGAATTGGA
AAACCAGAGACTGTGTTGGTTGAAATAGCTAAGGCTGTCGGAGCTGAAGCAGTGTATGCT
CATAGAGAAGTTTCGTATGATGAGGTTAAAGGGGAAGATAAGATTGAGAGTGTAATGAAG
GATGAGGGAGTGGAGGTTAAGTATTTTTGGGGTAGTACATTGTACCATGTGGATGATTTG
CCTTTTAAGTTGGAGGAAATGCCGACGAATTATGGAGGGTTTAGAGAGAAAGTGCAAGGG
TTGGAGGTAAGGAAGACAATTGAGGCATTGGATCAGTTGAGGGGATTGCCAGCTAGAGGT
GATGTGGAAACTGGGGAGATTCCTTCTTTGGTTGACTTGGGCCTCAATCCGAGCGCCACC
ATGGGTCAGAATGGAAAACCACCTGCTAATGCTTCCCTTTTGGGAGGAGAGAATGAAGCT
CTGCAGAGACTTAGAAAATTTGCAGCCGAATGCCAAGCCCAACCCAATAAGGAAAACAAG
GATGGCACTACTGACAGCATATATGGTGCAAACTTTTCTTGCAAAATATCTCCTTGGCTC
GCTATGGGATGTCTCTCTCCTCGTTCCATGTTTGATGAATTGAAAAAGTCCACTTCAAGA
ACGATTTCAGCTGCCTCTAGCCAGAAAGACGGTGGTAGTGGCACTGGGCTGAACTGGCTA
ATGTATGAGCTGTTATGGAGAGATTTTTTCAGATTCATCACCAAGAAATACAGCACTGCG
AAACAAAATAGTGCTGCTCCTGTTACTGCTTGTGTAGGAGCTGCTGCTTGA

Peptide Sequence

PEP ID

XP_016433586.1
PEP Infomation

PREDICTED: blue-light photoreceptor PHR2-like [Nicotiana tabacum]
Sequence

MDSKNQSSDNPENQTPQEDQQLVPCQPLPIASISLSLSTILPTHFLTPPKISSTVFRPNK
VKIPTQISSLSNLSLSASASLPPPTKSNFKSTFSANPLQDSLTLNPLRPSEPSNAAGLRR
ASIVWFRNDLRVHDNESLNAAHNESMSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES
VTDLRNNLQSRGSDLVVRIGKPETVLVEIAKAVGAEAVYAHREVSYDEVKGEDKIESVMK
DEGVEVKYFWGSTLYHVDDLPFKLEEMPTNYGGFREKVQGLEVRKTIEALDQLRGLPARG
DVETGEIPSLVDLGLNPSATMGQNGKPPANASLLGGENEALQRLRKFAAECQAQPNKENK
DGTTDSIYGANFSCKISPWLAMGCLSPRSMFDELKKSTSRTISAASSQKDGGSGTGLNWL
MYELLWRDFFRFITKKYSTAKQNSAAPVTACVGAAA

Transcript Sequence

Gene sequence data has not been registered.